Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col23a1Q8K4G2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col23a1Q8K4G2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Col23a1Q8K4G2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.97■■□□□ 1.59
Col23a1Q8K4G2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col23a1Q8K4G2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col23a1Q8K4G2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col23a1Q8K4G2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col23a1Q8K4G2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col23a1Q8K4G2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.94■■□□□ 1.58
Col23a1Q8K4G2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col23a1Q8K4G2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Col23a1Q8K4G2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col23a1Q8K4G2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Col23a1Q8K4G2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col23a1Q8K4G2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col23a1Q8K4G2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Gm27801-201ENSMUST00000184174 223 ntBASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col23a1Q8K4G2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col23a1Q8K4G2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col23a1Q8K4G2 Gm13148-201ENSMUST00000118892 745 ntBASIC24.9■■□□□ 1.58
Col23a1Q8K4G2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col23a1Q8K4G2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col23a1Q8K4G2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col23a1Q8K4G2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Col23a1Q8K4G2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Col23a1Q8K4G2 Gm13168-201ENSMUST00000121771 632 ntBASIC24.89■■□□□ 1.58
Col23a1Q8K4G2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Col23a1Q8K4G2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Col23a1Q8K4G2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col23a1Q8K4G2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Gm43859-201ENSMUST00000200075 1412 ntBASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Gm7977-201ENSMUST00000193787 748 ntBASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col23a1Q8K4G2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Col23a1Q8K4G2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.86■■□□□ 1.57
Col23a1Q8K4G2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col23a1Q8K4G2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col23a1Q8K4G2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col23a1Q8K4G2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Col23a1Q8K4G2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.85■■□□□ 1.57
Col23a1Q8K4G2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col23a1Q8K4G2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col23a1Q8K4G2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col23a1Q8K4G2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col23a1Q8K4G2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.84■■□□□ 1.57
Col23a1Q8K4G2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col23a1Q8K4G2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms