Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.84■□□□□ 0.77
Alms1Q8K4E0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Alms1Q8K4E0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Alms1Q8K4E0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Alms1Q8K4E0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.83■□□□□ 0.76
Alms1Q8K4E0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Alms1Q8K4E0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alms1Q8K4E0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.83■□□□□ 0.76
Alms1Q8K4E0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Alms1Q8K4E0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Alms1Q8K4E0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alms1Q8K4E0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.8■□□□□ 0.76
Alms1Q8K4E0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alms1Q8K4E0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.79■□□□□ 0.76
Alms1Q8K4E0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alms1Q8K4E0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alms1Q8K4E0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Alms1Q8K4E0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alms1Q8K4E0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alms1Q8K4E0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.77■□□□□ 0.76
Alms1Q8K4E0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alms1Q8K4E0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Alms1Q8K4E0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Alms1Q8K4E0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alms1Q8K4E0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alms1Q8K4E0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Alms1Q8K4E0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Alms1Q8K4E0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Alms1Q8K4E0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Alms1Q8K4E0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.77■□□□□ 0.75
Alms1Q8K4E0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Alms1Q8K4E0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Alms1Q8K4E0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Alms1Q8K4E0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Alms1Q8K4E0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Alms1Q8K4E0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alms1Q8K4E0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Smad6-203ENSMUST00000179458 273 ntBASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alms1Q8K4E0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.75■□□□□ 0.75
Alms1Q8K4E0 AV356131-201ENSMUST00000206201 750 ntBASIC19.75■□□□□ 0.75
Alms1Q8K4E0 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.74■□□□□ 0.75
Alms1Q8K4E0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alms1Q8K4E0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alms1Q8K4E0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Alms1Q8K4E0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alms1Q8K4E0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alms1Q8K4E0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms