Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.57□□□□□ -0.4
Cystm1Q8K353 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cystm1Q8K353 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cystm1Q8K353 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Cystm1Q8K353 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.55□□□□□ -0.4
Cystm1Q8K353 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cystm1Q8K353 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.54□□□□□ -0.4
Cystm1Q8K353 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cystm1Q8K353 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC12.53□□□□□ -0.4
Cystm1Q8K353 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cystm1Q8K353 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cystm1Q8K353 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cystm1Q8K353 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.52□□□□□ -0.4
Cystm1Q8K353 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cystm1Q8K353 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Cystm1Q8K353 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cystm1Q8K353 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Gm5812-201ENSMUST00000061073 957 ntBASIC12.52□□□□□ -0.41
Cystm1Q8K353 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cystm1Q8K353 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms