Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd3Q8CIK8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.84■□□□□ 0.61
Rfwd3Q8CIK8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd3Q8CIK8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd3Q8CIK8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd3Q8CIK8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd3Q8CIK8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Rfwd3Q8CIK8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd3Q8CIK8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rfwd3Q8CIK8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd3Q8CIK8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd3Q8CIK8 Gm13241-201ENSMUST00000094493 780 ntBASIC18.81■□□□□ 0.6
Rfwd3Q8CIK8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd3Q8CIK8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Rfwd3Q8CIK8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd3Q8CIK8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd3Q8CIK8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Gm15039-201ENSMUST00000118914 875 ntBASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Gm43530-201ENSMUST00000195920 274 ntBASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd3Q8CIK8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfwd3Q8CIK8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfwd3Q8CIK8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfwd3Q8CIK8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfwd3Q8CIK8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfwd3Q8CIK8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfwd3Q8CIK8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfwd3Q8CIK8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfwd3Q8CIK8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.77■□□□□ 0.59
Rfwd3Q8CIK8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
Rfwd3Q8CIK8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfwd3Q8CIK8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfwd3Q8CIK8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfwd3Q8CIK8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfwd3Q8CIK8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.76■□□□□ 0.59
Rfwd3Q8CIK8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rfwd3Q8CIK8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms