Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clip4Q8CI96 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Clip4Q8CI96 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Clip4Q8CI96 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip4Q8CI96 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip4Q8CI96 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip4Q8CI96 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip4Q8CI96 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip4Q8CI96 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
Clip4Q8CI96 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.15■□□□□ 0.82
Clip4Q8CI96 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.15■□□□□ 0.82
Clip4Q8CI96 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clip4Q8CI96 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Clip4Q8CI96 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clip4Q8CI96 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip4Q8CI96 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clip4Q8CI96 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clip4Q8CI96 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clip4Q8CI96 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Clip4Q8CI96 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clip4Q8CI96 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clip4Q8CI96 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clip4Q8CI96 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clip4Q8CI96 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clip4Q8CI96 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clip4Q8CI96 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.1■□□□□ 0.81
Clip4Q8CI96 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Clip4Q8CI96 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clip4Q8CI96 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clip4Q8CI96 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.08■□□□□ 0.81
Clip4Q8CI96 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip4Q8CI96 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip4Q8CI96 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip4Q8CI96 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip4Q8CI96 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip4Q8CI96 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms