Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC26.21■■□□□ 1.79
Rab11fip3Q8CHD8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rab11fip3Q8CHD8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC26.21■■□□□ 1.79
Rab11fip3Q8CHD8 Smad6-203ENSMUST00000179458 273 ntBASIC26.21■■□□□ 1.79
Rab11fip3Q8CHD8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.21■■□□□ 1.79
Rab11fip3Q8CHD8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.2■■□□□ 1.78
Rab11fip3Q8CHD8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.2■■□□□ 1.78
Rab11fip3Q8CHD8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rab11fip3Q8CHD8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Rab11fip3Q8CHD8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rab11fip3Q8CHD8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC26.19■■□□□ 1.78
Rab11fip3Q8CHD8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC26.19■■□□□ 1.78
Rab11fip3Q8CHD8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rab11fip3Q8CHD8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Gm43060-201ENSMUST00000200621 289 ntBASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Rab11fip3Q8CHD8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rab11fip3Q8CHD8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rab11fip3Q8CHD8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rab11fip3Q8CHD8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rab11fip3Q8CHD8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Rab11fip3Q8CHD8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rab11fip3Q8CHD8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rab11fip3Q8CHD8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab11fip3Q8CHD8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rab11fip3Q8CHD8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rab11fip3Q8CHD8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rab11fip3Q8CHD8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rab11fip3Q8CHD8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rab11fip3Q8CHD8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rab11fip3Q8CHD8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rab11fip3Q8CHD8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Rab11fip3Q8CHD8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rab11fip3Q8CHD8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rab11fip3Q8CHD8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rab11fip3Q8CHD8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rab11fip3Q8CHD8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC26.1■■□□□ 1.77
Rab11fip3Q8CHD8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip3Q8CHD8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip3Q8CHD8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip3Q8CHD8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip3Q8CHD8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab11fip3Q8CHD8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rab11fip3Q8CHD8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rab11fip3Q8CHD8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rab11fip3Q8CHD8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC26.09■■□□□ 1.77
Rab11fip3Q8CHD8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rab11fip3Q8CHD8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rab11fip3Q8CHD8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC26.08■■□□□ 1.77
Rab11fip3Q8CHD8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC26.08■■□□□ 1.77
Rab11fip3Q8CHD8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Rab11fip3Q8CHD8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rab11fip3Q8CHD8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rab11fip3Q8CHD8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rab11fip3Q8CHD8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rab11fip3Q8CHD8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rab11fip3Q8CHD8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rab11fip3Q8CHD8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rab11fip3Q8CHD8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rab11fip3Q8CHD8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms