Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb7Q8CDY9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb7Q8CDY9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb7Q8CDY9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb7Q8CDY9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb7Q8CDY9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb7Q8CDY9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb7Q8CDY9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb7Q8CDY9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb7Q8CDY9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb7Q8CDY9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Rps24-207ENSMUST00000224568 714 ntBASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb7Q8CDY9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms