Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vcpip1Q8CDG3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vcpip1Q8CDG3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Gm9959-201ENSMUST00000068277 390 ntBASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vcpip1Q8CDG3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vcpip1Q8CDG3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vcpip1Q8CDG3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Vcpip1Q8CDG3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vcpip1Q8CDG3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vcpip1Q8CDG3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vcpip1Q8CDG3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.59■■□□□ 1.05
Vcpip1Q8CDG3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vcpip1Q8CDG3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vcpip1Q8CDG3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vcpip1Q8CDG3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vcpip1Q8CDG3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vcpip1Q8CDG3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vcpip1Q8CDG3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vcpip1Q8CDG3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Vcpip1Q8CDG3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vcpip1Q8CDG3 Gm40881-201ENSMUST00000223397 166 ntBASIC21.57■■□□□ 1.04
Vcpip1Q8CDG3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vcpip1Q8CDG3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vcpip1Q8CDG3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vcpip1Q8CDG3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vcpip1Q8CDG3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.55■■□□□ 1.04
Vcpip1Q8CDG3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vcpip1Q8CDG3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vcpip1Q8CDG3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Vcpip1Q8CDG3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.52■■□□□ 1.04
Vcpip1Q8CDG3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms