Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ptcd1Q8C2E4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ptcd1Q8C2E4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.87■■□□□ 1.57
Ptcd1Q8C2E4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptcd1Q8C2E4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ptcd1Q8C2E4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptcd1Q8C2E4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptcd1Q8C2E4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptcd1Q8C2E4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC24.83■■□□□ 1.57
Ptcd1Q8C2E4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.83■■□□□ 1.57
Ptcd1Q8C2E4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Ptcd1Q8C2E4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ptcd1Q8C2E4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptcd1Q8C2E4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ptcd1Q8C2E4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptcd1Q8C2E4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.79■■□□□ 1.56
Ptcd1Q8C2E4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptcd1Q8C2E4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC24.79■■□□□ 1.56
Ptcd1Q8C2E4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Ptcd1Q8C2E4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptcd1Q8C2E4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.79■■□□□ 1.56
Ptcd1Q8C2E4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ptcd1Q8C2E4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ptcd1Q8C2E4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ptcd1Q8C2E4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ptcd1Q8C2E4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ptcd1Q8C2E4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC24.75■■□□□ 1.55
Ptcd1Q8C2E4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms