Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrtm1Q8BXQ3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrtm1Q8BXQ3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lrtm1Q8BXQ3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrtm1Q8BXQ3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lrtm1Q8BXQ3 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.58■□□□□ 0.41
Lrtm1Q8BXQ3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.58■□□□□ 0.4
Lrtm1Q8BXQ3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrtm1Q8BXQ3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrtm1Q8BXQ3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrtm1Q8BXQ3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrtm1Q8BXQ3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.53■□□□□ 0.4
Lrtm1Q8BXQ3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrtm1Q8BXQ3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lrtm1Q8BXQ3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.51■□□□□ 0.39
Lrtm1Q8BXQ3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms