Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Gm21956-201ENSMUST00000179946 522 ntBASIC17.79■□□□□ 0.44
Ube3dQ8BX13 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Ube3dQ8BX13 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ube3dQ8BX13 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3dQ8BX13 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.77■□□□□ 0.44
Ube3dQ8BX13 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3dQ8BX13 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.77■□□□□ 0.43
Ube3dQ8BX13 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3dQ8BX13 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3dQ8BX13 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3dQ8BX13 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3dQ8BX13 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3dQ8BX13 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3dQ8BX13 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Golgb1-201ENSMUST00000023534 498 ntBASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3dQ8BX13 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.72■□□□□ 0.43
Ube3dQ8BX13 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3dQ8BX13 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms