Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk5rap1Q8BTW8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Mir6236-201ENSMUST00000184437 123 ntBASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk5rap1Q8BTW8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk5rap1Q8BTW8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk5rap1Q8BTW8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk5rap1Q8BTW8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk5rap1Q8BTW8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk5rap1Q8BTW8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.08■□□□□ 0.64
Cdk5rap1Q8BTW8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk5rap1Q8BTW8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk5rap1Q8BTW8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk5rap1Q8BTW8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk5rap1Q8BTW8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap1Q8BTW8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap1Q8BTW8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap1Q8BTW8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap1Q8BTW8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk5rap1Q8BTW8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk5rap1Q8BTW8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk5rap1Q8BTW8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk5rap1Q8BTW8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk5rap1Q8BTW8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms