Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc43a1Q8BSM7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc43a1Q8BSM7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc43a1Q8BSM7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc43a1Q8BSM7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc43a1Q8BSM7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.37■□□□□ 0.85
Slc43a1Q8BSM7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc43a1Q8BSM7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc43a1Q8BSM7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Gm10493-201ENSMUST00000097270 612 ntBASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc43a1Q8BSM7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc43a1Q8BSM7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc43a1Q8BSM7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.33■□□□□ 0.85
Slc43a1Q8BSM7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc43a1Q8BSM7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc43a1Q8BSM7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc43a1Q8BSM7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc43a1Q8BSM7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc43a1Q8BSM7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc43a1Q8BSM7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Slc43a1Q8BSM7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc43a1Q8BSM7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc43a1Q8BSM7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.31■□□□□ 0.84
Slc43a1Q8BSM7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc43a1Q8BSM7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.3■□□□□ 0.84
Slc43a1Q8BSM7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc43a1Q8BSM7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc43a1Q8BSM7 Gm11421-201ENSMUST00000122124 294 ntBASIC20.28■□□□□ 0.84
Slc43a1Q8BSM7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc43a1Q8BSM7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.28■□□□□ 0.84
Slc43a1Q8BSM7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc43a1Q8BSM7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc43a1Q8BSM7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc43a1Q8BSM7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc43a1Q8BSM7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc43a1Q8BSM7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms