Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sfr1Q8BP27 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Gm21956-201ENSMUST00000179946 522 ntBASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sfr1Q8BP27 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sfr1Q8BP27 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.36■□□□□ 0.85
Sfr1Q8BP27 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sfr1Q8BP27 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sfr1Q8BP27 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sfr1Q8BP27 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sfr1Q8BP27 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sfr1Q8BP27 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sfr1Q8BP27 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sfr1Q8BP27 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sfr1Q8BP27 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Sfr1Q8BP27 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sfr1Q8BP27 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
Sfr1Q8BP27 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sfr1Q8BP27 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms