Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2bQ8BJF9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2bQ8BJF9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chmp2bQ8BJF9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2bQ8BJF9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2bQ8BJF9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2bQ8BJF9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2bQ8BJF9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2bQ8BJF9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2bQ8BJF9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp2bQ8BJF9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp2bQ8BJF9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp2bQ8BJF9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2bQ8BJF9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2bQ8BJF9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chmp2bQ8BJF9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.5■□□□□ 0.87
Chmp2bQ8BJF9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2bQ8BJF9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2bQ8BJF9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.5■□□□□ 0.87
Chmp2bQ8BJF9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.49■□□□□ 0.87
Chmp2bQ8BJF9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2bQ8BJF9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Chmp2bQ8BJF9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2bQ8BJF9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Chmp2bQ8BJF9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2bQ8BJF9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2bQ8BJF9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2bQ8BJF9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2bQ8BJF9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms