Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Gm22238-201ENSMUST00000175222 88 ntBASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
Clrn3Q8BHH8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn3Q8BHH8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clrn3Q8BHH8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clrn3Q8BHH8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Clrn3Q8BHH8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clrn3Q8BHH8 Gm9870-201ENSMUST00000063874 645 ntBASIC18.77■□□□□ 0.6
Clrn3Q8BHH8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clrn3Q8BHH8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clrn3Q8BHH8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clrn3Q8BHH8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.77■□□□□ 0.59
Clrn3Q8BHH8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clrn3Q8BHH8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clrn3Q8BHH8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Clrn3Q8BHH8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn3Q8BHH8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn3Q8BHH8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn3Q8BHH8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn3Q8BHH8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn3Q8BHH8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Clrn3Q8BHH8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn3Q8BHH8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.7■□□□□ 0.58
Clrn3Q8BHH8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Clrn3Q8BHH8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms