Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.6■■□□□ 1.05
Trim65Q8BFW4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim65Q8BFW4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim65Q8BFW4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim65Q8BFW4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Gm43530-201ENSMUST00000195920 274 ntBASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim65Q8BFW4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trim65Q8BFW4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim65Q8BFW4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim65Q8BFW4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Trim65Q8BFW4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim65Q8BFW4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim65Q8BFW4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim65Q8BFW4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim65Q8BFW4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim65Q8BFW4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim65Q8BFW4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim65Q8BFW4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms