Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atpaf1Q811I0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atpaf1Q811I0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.39■□□□□ 0.22
Atpaf1Q811I0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Atpaf1Q811I0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atpaf1Q811I0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atpaf1Q811I0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Gm44428-201ENSMUST00000204474 874 ntBASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atpaf1Q811I0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atpaf1Q811I0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atpaf1Q811I0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.33■□□□□ 0.21
Atpaf1Q811I0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Atpaf1Q811I0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.33■□□□□ 0.21
Atpaf1Q811I0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atpaf1Q811I0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atpaf1Q811I0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atpaf1Q811I0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms