Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn34b3Q80ZS5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn34b3Q80ZS5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.73■□□□□ 0.59
Cldn34b3Q80ZS5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn34b3Q80ZS5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn34b3Q80ZS5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn34b3Q80ZS5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn34b3Q80ZS5 Gm12922-201ENSMUST00000120626 809 ntBASIC18.71■□□□□ 0.59
Cldn34b3Q80ZS5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cldn34b3Q80ZS5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn34b3Q80ZS5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn34b3Q80ZS5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldn34b3Q80ZS5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn34b3Q80ZS5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Golgb1-201ENSMUST00000023534 498 ntBASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn34b3Q80ZS5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Mir6236-201ENSMUST00000184437 123 ntBASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn34b3Q80ZS5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn34b3Q80ZS5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn34b3Q80ZS5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn34b3Q80ZS5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms