Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkhd1l1Q80ZA4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pkhd1l1Q80ZA4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm42418-201ENSMUST00000182010 1831 ntBASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm13234-201ENSMUST00000120010 747 ntBASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm7514-201ENSMUST00000209475 934 ntBASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm9988-201ENSMUST00000069786 435 ntBASIC12.16□□□□□ -0.46
Pkhd1l1Q80ZA4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Gm27801-201ENSMUST00000184174 223 ntBASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pkhd1l1Q80ZA4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pkhd1l1Q80ZA4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pkhd1l1Q80ZA4 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.14□□□□□ -0.47
Pkhd1l1Q80ZA4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms