Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Skida1Q80YR3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Skida1Q80YR3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Skida1Q80YR3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Skida1Q80YR3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Gm7430-201ENSMUST00000193824 1144 ntBASIC19.6■□□□□ 0.73
Skida1Q80YR3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Skida1Q80YR3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.59■□□□□ 0.73
Skida1Q80YR3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.59■□□□□ 0.73
Skida1Q80YR3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Skida1Q80YR3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Skida1Q80YR3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Skida1Q80YR3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Skida1Q80YR3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Skida1Q80YR3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Skida1Q80YR3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Skida1Q80YR3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.58■□□□□ 0.72
Skida1Q80YR3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Skida1Q80YR3 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.58■□□□□ 0.72
Skida1Q80YR3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Gm9870-201ENSMUST00000063874 645 ntBASIC19.58■□□□□ 0.72
Skida1Q80YR3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Skida1Q80YR3 Gm37965-201ENSMUST00000195304 1362 ntBASIC19.57■□□□□ 0.72
Skida1Q80YR3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Gm25116-201ENSMUST00000157191 122 ntBASIC19.57■□□□□ 0.72
Skida1Q80YR3 Gm37641-201ENSMUST00000193837 239 ntBASIC19.57■□□□□ 0.72
Skida1Q80YR3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Skida1Q80YR3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Gm22885-201ENSMUST00000157410 107 ntBASIC19.56■□□□□ 0.72
Skida1Q80YR3 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Skida1Q80YR3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Skida1Q80YR3 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Skida1Q80YR3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Skida1Q80YR3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Skida1Q80YR3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Skida1Q80YR3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Skida1Q80YR3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Skida1Q80YR3 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.54■□□□□ 0.72
Skida1Q80YR3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Skida1Q80YR3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.54■□□□□ 0.72
Skida1Q80YR3 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.54■□□□□ 0.72
Skida1Q80YR3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Skida1Q80YR3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Skida1Q80YR3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC19.53■□□□□ 0.72
Skida1Q80YR3 Gm18377-201ENSMUST00000215141 607 ntBASIC19.53■□□□□ 0.72
Skida1Q80YR3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Skida1Q80YR3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Skida1Q80YR3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms