Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vrk1Q80X41 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Gm10493-201ENSMUST00000097270 612 ntBASIC19.21■□□□□ 0.67
Vrk1Q80X41 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk1Q80X41 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.2■□□□□ 0.66
Vrk1Q80X41 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk1Q80X41 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Gm40848-201ENSMUST00000221998 324 ntBASIC19.19■□□□□ 0.66
Vrk1Q80X41 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Vrk1Q80X41 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk1Q80X41 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk1Q80X41 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.17■□□□□ 0.66
Vrk1Q80X41 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk1Q80X41 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Smad6-203ENSMUST00000179458 273 ntBASIC19.16■□□□□ 0.66
Vrk1Q80X41 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Gm29257-201ENSMUST00000186115 639 ntBASIC19.16■□□□□ 0.66
Vrk1Q80X41 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.16■□□□□ 0.66
Vrk1Q80X41 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.15■□□□□ 0.66
Vrk1Q80X41 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vrk1Q80X41 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vrk1Q80X41 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vrk1Q80X41 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Gm7291-201ENSMUST00000199147 382 ntBASIC19.14■□□□□ 0.65
Vrk1Q80X41 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.14■□□□□ 0.65
Vrk1Q80X41 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.14■□□□□ 0.65
Vrk1Q80X41 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk1Q80X41 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms