Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.93■□□□□ 0.94
Srrm3Q80WV7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srrm3Q80WV7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srrm3Q80WV7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srrm3Q80WV7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srrm3Q80WV7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Srrm3Q80WV7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Srrm3Q80WV7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Srrm3Q80WV7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Srrm3Q80WV7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Srrm3Q80WV7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Srrm3Q80WV7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Srrm3Q80WV7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Srrm3Q80WV7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Srrm3Q80WV7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm3Q80WV7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Srrm3Q80WV7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Srrm3Q80WV7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Srrm3Q80WV7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm3Q80WV7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
Srrm3Q80WV7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm3Q80WV7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Srrm3Q80WV7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Etf1-202ENSMUST00000180351 108 ntBASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm3Q80WV7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.86■□□□□ 0.93
Srrm3Q80WV7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm3Q80WV7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm3Q80WV7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.84■□□□□ 0.93
Srrm3Q80WV7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm3Q80WV7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm3Q80WV7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Srrm3Q80WV7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm3Q80WV7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm3Q80WV7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Srrm3Q80WV7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.83■□□□□ 0.93
Srrm3Q80WV7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.83■□□□□ 0.93
Srrm3Q80WV7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm3Q80WV7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm3Q80WV7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Srrm3Q80WV7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srrm3Q80WV7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.83■□□□□ 0.92
Srrm3Q80WV7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srrm3Q80WV7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Srrm3Q80WV7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm3Q80WV7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm3Q80WV7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm3Q80WV7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm3Q80WV7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Srrm3Q80WV7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srrm3Q80WV7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srrm3Q80WV7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms