Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr5Q80TP3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr5Q80TP3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr5Q80TP3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.84■□□□□ 0.45
Ubr5Q80TP3 Gm9988-201ENSMUST00000069786 435 ntBASIC17.84■□□□□ 0.45
Ubr5Q80TP3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr5Q80TP3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubr5Q80TP3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.84■□□□□ 0.45
Ubr5Q80TP3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.84■□□□□ 0.45
Ubr5Q80TP3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubr5Q80TP3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ubr5Q80TP3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubr5Q80TP3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr5Q80TP3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr5Q80TP3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.83■□□□□ 0.44
Ubr5Q80TP3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Ubr5Q80TP3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.83■□□□□ 0.44
Ubr5Q80TP3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Gm13168-201ENSMUST00000121771 632 ntBASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ubr5Q80TP3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubr5Q80TP3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.81■□□□□ 0.44
Ubr5Q80TP3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.81■□□□□ 0.44
Ubr5Q80TP3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubr5Q80TP3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubr5Q80TP3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr5Q80TP3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.79■□□□□ 0.44
Ubr5Q80TP3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.79■□□□□ 0.44
Ubr5Q80TP3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.79■□□□□ 0.44
Ubr5Q80TP3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr5Q80TP3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubr5Q80TP3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubr5Q80TP3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.77■□□□□ 0.44
Ubr5Q80TP3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Ubr5Q80TP3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.77■□□□□ 0.43
Ubr5Q80TP3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ubr5Q80TP3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr5Q80TP3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr5Q80TP3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr5Q80TP3 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.74■□□□□ 0.43
Ubr5Q80TP3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms