Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3d21Q7TSG5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3d21Q7TSG5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3d21Q7TSG5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3d21Q7TSG5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3d21Q7TSG5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.93■■□□□ 1.1
Sh3d21Q7TSG5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.92■■□□□ 1.1
Sh3d21Q7TSG5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3d21Q7TSG5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Gm43530-201ENSMUST00000195920 274 ntBASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3d21Q7TSG5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Sh3d21Q7TSG5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sh3d21Q7TSG5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3d21Q7TSG5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.88■■□□□ 1.09
Sh3d21Q7TSG5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms