Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn4bQ7M729 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Scn4bQ7M729 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.6■□□□□ 0.73
Scn4bQ7M729 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Scn4bQ7M729 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn4bQ7M729 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn4bQ7M729 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn4bQ7M729 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn4bQ7M729 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn4bQ7M729 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn4bQ7M729 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Scn4bQ7M729 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Scn4bQ7M729 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Scn4bQ7M729 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Scn4bQ7M729 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Gm22238-201ENSMUST00000175222 88 ntBASIC19.57■□□□□ 0.72
Scn4bQ7M729 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn4bQ7M729 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn4bQ7M729 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn4bQ7M729 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.55■□□□□ 0.72
Scn4bQ7M729 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.55■□□□□ 0.72
Scn4bQ7M729 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn4bQ7M729 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn4bQ7M729 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.52■□□□□ 0.72
Scn4bQ7M729 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scn4bQ7M729 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Scn4bQ7M729 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Scn4bQ7M729 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn4bQ7M729 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.51■□□□□ 0.71
Scn4bQ7M729 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn4bQ7M729 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms