Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.14■□□□□ 0.33
Rif1Q6PR54 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rif1Q6PR54 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rif1Q6PR54 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rif1Q6PR54 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rif1Q6PR54 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.12■□□□□ 0.33
Rif1Q6PR54 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rif1Q6PR54 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rif1Q6PR54 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Rif1Q6PR54 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rif1Q6PR54 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rif1Q6PR54 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.11■□□□□ 0.33
Rif1Q6PR54 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.11■□□□□ 0.33
Rif1Q6PR54 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rif1Q6PR54 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rif1Q6PR54 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Gm6211-202ENSMUST00000167849 925 ntBASIC17.09■□□□□ 0.33
Rif1Q6PR54 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.09■□□□□ 0.33
Rif1Q6PR54 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rif1Q6PR54 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rif1Q6PR54 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rif1Q6PR54 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rif1Q6PR54 Gm5643-201ENSMUST00000117081 966 ntBASIC17.08■□□□□ 0.33
Rif1Q6PR54 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rif1Q6PR54 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rif1Q6PR54 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rif1Q6PR54 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rif1Q6PR54 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rif1Q6PR54 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rif1Q6PR54 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rif1Q6PR54 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.08■□□□□ 0.32
Rif1Q6PR54 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rif1Q6PR54 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rif1Q6PR54 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rif1Q6PR54 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rif1Q6PR54 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rif1Q6PR54 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rif1Q6PR54 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rif1Q6PR54 Gm11249-201ENSMUST00000117071 859 ntBASIC17.07■□□□□ 0.32
Rif1Q6PR54 Gm6433-201ENSMUST00000118634 875 ntBASIC17.07■□□□□ 0.32
Rif1Q6PR54 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rif1Q6PR54 Gm9988-201ENSMUST00000069786 435 ntBASIC17.07■□□□□ 0.32
Rif1Q6PR54 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.06■□□□□ 0.32
Rif1Q6PR54 Gm37055-201ENSMUST00000191866 133 ntBASIC17.06■□□□□ 0.32
Rif1Q6PR54 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rif1Q6PR54 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rif1Q6PR54 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.05■□□□□ 0.32
Rif1Q6PR54 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Rif1Q6PR54 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
Rif1Q6PR54 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rif1Q6PR54 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.05■□□□□ 0.32
Rif1Q6PR54 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.04■□□□□ 0.32
Rif1Q6PR54 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.04■□□□□ 0.32
Rif1Q6PR54 Gm10517-202ENSMUST00000192970 758 ntBASIC17.04■□□□□ 0.32
Rif1Q6PR54 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rif1Q6PR54 Gm5867-201ENSMUST00000063197 592 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms