Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a1Q6PEM8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc46a1Q6PEM8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Slc46a1Q6PEM8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a1Q6PEM8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a1Q6PEM8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc46a1Q6PEM8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a1Q6PEM8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Gm12251-201ENSMUST00000117893 792 ntBASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a1Q6PEM8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.58■□□□□ 0.41
Slc46a1Q6PEM8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.58■□□□□ 0.41
Slc46a1Q6PEM8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc46a1Q6PEM8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a1Q6PEM8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc46a1Q6PEM8 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.56■□□□□ 0.4
Slc46a1Q6PEM8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms