Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
ShbQ6PD21 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ShbQ6PD21 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ShbQ6PD21 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.27■■□□□ 1.16
ShbQ6PD21 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ShbQ6PD21 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ShbQ6PD21 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.26■■□□□ 1.15
ShbQ6PD21 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ShbQ6PD21 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ShbQ6PD21 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
ShbQ6PD21 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ShbQ6PD21 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ShbQ6PD21 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ShbQ6PD21 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ShbQ6PD21 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ShbQ6PD21 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ShbQ6PD21 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ShbQ6PD21 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.25■■□□□ 1.15
ShbQ6PD21 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.25■■□□□ 1.15
ShbQ6PD21 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.25■■□□□ 1.15
ShbQ6PD21 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ShbQ6PD21 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ShbQ6PD21 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.24■■□□□ 1.15
ShbQ6PD21 Gm27801-201ENSMUST00000184174 223 ntBASIC22.24■■□□□ 1.15
ShbQ6PD21 Mir7071-201ENSMUST00000184847 69 ntBASIC22.24■■□□□ 1.15
ShbQ6PD21 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ShbQ6PD21 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ShbQ6PD21 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ShbQ6PD21 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ShbQ6PD21 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ShbQ6PD21 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ShbQ6PD21 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.23■■□□□ 1.15
ShbQ6PD21 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ShbQ6PD21 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ShbQ6PD21 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ShbQ6PD21 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ShbQ6PD21 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ShbQ6PD21 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ShbQ6PD21 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ShbQ6PD21 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
ShbQ6PD21 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
ShbQ6PD21 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.21■■□□□ 1.15
ShbQ6PD21 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ShbQ6PD21 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ShbQ6PD21 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.2■■□□□ 1.14
ShbQ6PD21 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.2■■□□□ 1.14
ShbQ6PD21 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.2■■□□□ 1.14
ShbQ6PD21 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
ShbQ6PD21 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ShbQ6PD21 Gm13148-201ENSMUST00000118892 745 ntBASIC22.19■■□□□ 1.14
ShbQ6PD21 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ShbQ6PD21 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ShbQ6PD21 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ShbQ6PD21 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
ShbQ6PD21 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.19■■□□□ 1.14
ShbQ6PD21 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ShbQ6PD21 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ShbQ6PD21 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ShbQ6PD21 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.18■■□□□ 1.14
ShbQ6PD21 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ShbQ6PD21 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.18■■□□□ 1.14
ShbQ6PD21 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ShbQ6PD21 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
ShbQ6PD21 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ShbQ6PD21 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ShbQ6PD21 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ShbQ6PD21 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ShbQ6PD21 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ShbQ6PD21 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ShbQ6PD21 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ShbQ6PD21 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.17■■□□□ 1.14
ShbQ6PD21 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ShbQ6PD21 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ShbQ6PD21 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ShbQ6PD21 Gm13168-201ENSMUST00000121771 632 ntBASIC22.16■■□□□ 1.14
ShbQ6PD21 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ShbQ6PD21 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.15■■□□□ 1.14
ShbQ6PD21 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
ShbQ6PD21 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.15■■□□□ 1.14
ShbQ6PD21 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ShbQ6PD21 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.15■■□□□ 1.14
ShbQ6PD21 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ShbQ6PD21 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ShbQ6PD21 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ShbQ6PD21 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.14■■□□□ 1.13
ShbQ6PD21 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms