Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd3Q6P9Z1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd3Q6P9Z1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd3Q6P9Z1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd3Q6P9Z1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd3Q6P9Z1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd3Q6P9Z1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Gm5921-201ENSMUST00000075898 882 ntBASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Smarcd3Q6P9Z1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Smarcd3Q6P9Z1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd3Q6P9Z1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Gm10399-202ENSMUST00000202768 748 ntBASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd3Q6P9Z1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd3Q6P9Z1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
Smarcd3Q6P9Z1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.33■□□□□ 0.52
Smarcd3Q6P9Z1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.33■□□□□ 0.52
Smarcd3Q6P9Z1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smarcd3Q6P9Z1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd3Q6P9Z1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms