Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Gm29257-201ENSMUST00000186115 639 ntBASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Gm7291-201ENSMUST00000199147 382 ntBASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Gm42642-201ENSMUST00000200683 355 ntBASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Gm42569-201ENSMUST00000200539 472 ntBASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Gm10849-201ENSMUST00000100397 618 ntBASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Gm11421-201ENSMUST00000122124 294 ntBASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shkbp1Q6P7W2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Gm27405-201ENSMUST00000184201 112 ntBASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shkbp1Q6P7W2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shkbp1Q6P7W2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shkbp1Q6P7W2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 170.4 ms