Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VclQ64727 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VclQ64727 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VclQ64727 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VclQ64727 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VclQ64727 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VclQ64727 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VclQ64727 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VclQ64727 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VclQ64727 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VclQ64727 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
VclQ64727 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.73■□□□□ 0.75
VclQ64727 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VclQ64727 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.73■□□□□ 0.75
VclQ64727 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
VclQ64727 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VclQ64727 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VclQ64727 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VclQ64727 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.72■□□□□ 0.75
VclQ64727 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VclQ64727 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.72■□□□□ 0.75
VclQ64727 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VclQ64727 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VclQ64727 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VclQ64727 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.71■□□□□ 0.75
VclQ64727 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VclQ64727 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VclQ64727 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VclQ64727 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VclQ64727 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
VclQ64727 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.7■□□□□ 0.74
VclQ64727 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.7■□□□□ 0.74
VclQ64727 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VclQ64727 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VclQ64727 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VclQ64727 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.69■□□□□ 0.74
VclQ64727 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VclQ64727 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VclQ64727 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VclQ64727 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VclQ64727 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VclQ64727 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VclQ64727 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VclQ64727 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VclQ64727 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VclQ64727 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.68■□□□□ 0.74
VclQ64727 Gm27454-201ENSMUST00000185090 204 ntBASIC19.68■□□□□ 0.74
VclQ64727 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.68■□□□□ 0.74
VclQ64727 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.67■□□□□ 0.74
VclQ64727 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VclQ64727 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VclQ64727 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.66■□□□□ 0.74
VclQ64727 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VclQ64727 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VclQ64727 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VclQ64727 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VclQ64727 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.65■□□□□ 0.74
VclQ64727 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VclQ64727 Gm43137-201ENSMUST00000198052 594 ntBASIC19.65■□□□□ 0.74
VclQ64727 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VclQ64727 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VclQ64727 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VclQ64727 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.65■□□□□ 0.74
VclQ64727 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VclQ64727 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms