Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.74■□□□□ 0.27
Commd3Q63829 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.74■□□□□ 0.27
Commd3Q63829 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Commd3Q63829 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.73■□□□□ 0.27
Commd3Q63829 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Commd3Q63829 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.73■□□□□ 0.27
Commd3Q63829 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Commd3Q63829 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Commd3Q63829 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.73■□□□□ 0.27
Commd3Q63829 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Commd3Q63829 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.72■□□□□ 0.27
Commd3Q63829 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Commd3Q63829 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.72■□□□□ 0.27
Commd3Q63829 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Commd3Q63829 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.72■□□□□ 0.27
Commd3Q63829 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.71■□□□□ 0.27
Commd3Q63829 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Commd3Q63829 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Commd3Q63829 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Commd3Q63829 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Commd3Q63829 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.69■□□□□ 0.26
Commd3Q63829 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Commd3Q63829 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.69■□□□□ 0.26
Commd3Q63829 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Commd3Q63829 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Commd3Q63829 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.69■□□□□ 0.26
Commd3Q63829 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.68■□□□□ 0.26
Commd3Q63829 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.68■□□□□ 0.26
Commd3Q63829 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.68■□□□□ 0.26
Commd3Q63829 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Commd3Q63829 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Commd3Q63829 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Commd3Q63829 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Commd3Q63829 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Commd3Q63829 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Commd3Q63829 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Commd3Q63829 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Commd3Q63829 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms