Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six1Q62231 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six1Q62231 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six1Q62231 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.76■□□□□ 0.91
Six1Q62231 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Six1Q62231 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six1Q62231 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Six1Q62231 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six1Q62231 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Six1Q62231 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Six1Q62231 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six1Q62231 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Six1Q62231 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Six1Q62231 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
Six1Q62231 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.75■□□□□ 0.91
Six1Q62231 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Six1Q62231 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Six1Q62231 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Six1Q62231 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.74■□□□□ 0.91
Six1Q62231 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.74■□□□□ 0.91
Six1Q62231 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six1Q62231 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six1Q62231 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Six1Q62231 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six1Q62231 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Six1Q62231 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Six1Q62231 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Six1Q62231 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six1Q62231 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six1Q62231 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Six1Q62231 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Six1Q62231 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Six1Q62231 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Six1Q62231 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Six1Q62231 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.72■□□□□ 0.91
Six1Q62231 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.72■□□□□ 0.91
Six1Q62231 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six1Q62231 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six1Q62231 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.71■□□□□ 0.91
Six1Q62231 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six1Q62231 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six1Q62231 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six1Q62231 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Six1Q62231 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Six1Q62231 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six1Q62231 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six1Q62231 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Six1Q62231 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.7■□□□□ 0.9
Six1Q62231 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Six1Q62231 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Six1Q62231 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.7■□□□□ 0.9
Six1Q62231 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six1Q62231 Gm40881-201ENSMUST00000223397 166 ntBASIC20.7■□□□□ 0.9
Six1Q62231 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six1Q62231 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six1Q62231 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six1Q62231 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six1Q62231 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Six1Q62231 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six1Q62231 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six1Q62231 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six1Q62231 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Six1Q62231 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six1Q62231 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six1Q62231 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Six1Q62231 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.67■□□□□ 0.9
Six1Q62231 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six1Q62231 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
Six1Q62231 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six1Q62231 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six1Q62231 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six1Q62231 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Six1Q62231 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Six1Q62231 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six1Q62231 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.66■□□□□ 0.9
Six1Q62231 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six1Q62231 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.66■□□□□ 0.9
Six1Q62231 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six1Q62231 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Six1Q62231 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six1Q62231 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Six1Q62231 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six1Q62231 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Six1Q62231 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six1Q62231 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six1Q62231 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Six1Q62231 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six1Q62231 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms