Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim21Q62191 Gm40881-201ENSMUST00000223397 166 ntBASIC21.18■□□□□ 0.98
Trim21Q62191 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim21Q62191 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim21Q62191 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.18■□□□□ 0.98
Trim21Q62191 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim21Q62191 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim21Q62191 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim21Q62191 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim21Q62191 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim21Q62191 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim21Q62191 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim21Q62191 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.17■□□□□ 0.98
Trim21Q62191 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim21Q62191 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim21Q62191 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Trim21Q62191 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
Trim21Q62191 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim21Q62191 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim21Q62191 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim21Q62191 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim21Q62191 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim21Q62191 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim21Q62191 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim21Q62191 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim21Q62191 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim21Q62191 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim21Q62191 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim21Q62191 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim21Q62191 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.14■□□□□ 0.97
Trim21Q62191 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim21Q62191 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim21Q62191 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim21Q62191 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim21Q62191 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim21Q62191 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim21Q62191 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim21Q62191 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim21Q62191 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim21Q62191 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim21Q62191 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim21Q62191 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim21Q62191 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim21Q62191 Gm15820-201ENSMUST00000201566 728 ntBASIC21.12■□□□□ 0.97
Trim21Q62191 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim21Q62191 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim21Q62191 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.12■□□□□ 0.97
Trim21Q62191 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim21Q62191 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim21Q62191 Gm7143-201ENSMUST00000222811 859 ntBASIC21.11■□□□□ 0.97
Trim21Q62191 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim21Q62191 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.1■□□□□ 0.97
Trim21Q62191 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim21Q62191 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim21Q62191 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim21Q62191 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim21Q62191 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim21Q62191 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim21Q62191 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim21Q62191 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim21Q62191 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim21Q62191 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim21Q62191 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Trim21Q62191 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim21Q62191 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trim21Q62191 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim21Q62191 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim21Q62191 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim21Q62191 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim21Q62191 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim21Q62191 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim21Q62191 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim21Q62191 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.07■□□□□ 0.96
Trim21Q62191 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim21Q62191 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim21Q62191 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms