Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf4Q61382 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Traf4Q61382 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf4Q61382 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Traf4Q61382 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Traf4Q61382 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf4Q61382 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Traf4Q61382 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf4Q61382 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Traf4Q61382 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.67■□□□□ 0.42
Traf4Q61382 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Traf4Q61382 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Traf4Q61382 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Traf4Q61382 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.67■□□□□ 0.42
Traf4Q61382 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf4Q61382 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.66■□□□□ 0.42
Traf4Q61382 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.66■□□□□ 0.42
Traf4Q61382 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.66■□□□□ 0.42
Traf4Q61382 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Traf4Q61382 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.66■□□□□ 0.42
Traf4Q61382 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Traf4Q61382 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Traf4Q61382 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf4Q61382 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf4Q61382 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.65■□□□□ 0.42
Traf4Q61382 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Traf4Q61382 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf4Q61382 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf4Q61382 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf4Q61382 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf4Q61382 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Traf4Q61382 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.64■□□□□ 0.41
Traf4Q61382 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Traf4Q61382 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Traf4Q61382 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Traf4Q61382 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Traf4Q61382 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Traf4Q61382 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Traf4Q61382 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Traf4Q61382 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Traf4Q61382 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Gm45417-201ENSMUST00000209533 758 ntBASIC17.63■□□□□ 0.41
Traf4Q61382 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.63■□□□□ 0.41
Traf4Q61382 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Traf4Q61382 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Traf4Q61382 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.62■□□□□ 0.41
Traf4Q61382 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Traf4Q61382 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Traf4Q61382 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Traf4Q61382 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Traf4Q61382 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Traf4Q61382 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Traf4Q61382 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Traf4Q61382 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Traf4Q61382 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Traf4Q61382 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Traf4Q61382 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.6■□□□□ 0.41
Traf4Q61382 Gm9870-201ENSMUST00000063874 645 ntBASIC17.6■□□□□ 0.41
Traf4Q61382 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms