Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six4Q61321 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six4Q61321 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six4Q61321 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Six4Q61321 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six4Q61321 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.37■□□□□ 0.85
Six4Q61321 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.37■□□□□ 0.85
Six4Q61321 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.37■□□□□ 0.85
Six4Q61321 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Six4Q61321 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six4Q61321 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six4Q61321 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.36■□□□□ 0.85
Six4Q61321 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Six4Q61321 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.36■□□□□ 0.85
Six4Q61321 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Six4Q61321 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six4Q61321 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six4Q61321 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six4Q61321 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Six4Q61321 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.35■□□□□ 0.85
Six4Q61321 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six4Q61321 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six4Q61321 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Six4Q61321 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six4Q61321 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six4Q61321 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.35■□□□□ 0.85
Six4Q61321 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six4Q61321 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Six4Q61321 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six4Q61321 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six4Q61321 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Six4Q61321 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six4Q61321 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six4Q61321 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six4Q61321 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six4Q61321 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six4Q61321 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six4Q61321 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Six4Q61321 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six4Q61321 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Six4Q61321 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six4Q61321 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six4Q61321 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Six4Q61321 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Six4Q61321 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Six4Q61321 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.32■□□□□ 0.84
Six4Q61321 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.32■□□□□ 0.84
Six4Q61321 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Six4Q61321 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.32■□□□□ 0.84
Six4Q61321 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six4Q61321 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Six4Q61321 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Six4Q61321 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Mir6236-201ENSMUST00000184437 123 ntBASIC20.31■□□□□ 0.84
Six4Q61321 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.31■□□□□ 0.84
Six4Q61321 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Six4Q61321 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Six4Q61321 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Six4Q61321 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six4Q61321 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.31■□□□□ 0.84
Six4Q61321 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
Six4Q61321 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six4Q61321 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Six4Q61321 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.29■□□□□ 0.84
Six4Q61321 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Six4Q61321 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Six4Q61321 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six4Q61321 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms