Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Col11a1Q61245 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.12■■□□□ 1.29
Col11a1Q61245 Gm4968-201ENSMUST00000071458 858 ntBASIC23.12■■□□□ 1.29
Col11a1Q61245 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.12■■□□□ 1.29
Col11a1Q61245 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.12■■□□□ 1.29
Col11a1Q61245 Gm13148-201ENSMUST00000118892 745 ntBASIC23.11■■□□□ 1.29
Col11a1Q61245 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.11■■□□□ 1.29
Col11a1Q61245 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col11a1Q61245 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col11a1Q61245 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col11a1Q61245 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.11■■□□□ 1.29
Col11a1Q61245 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.1■■□□□ 1.29
Col11a1Q61245 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.1■■□□□ 1.29
Col11a1Q61245 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col11a1Q61245 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.09■■□□□ 1.29
Col11a1Q61245 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Col11a1Q61245 Mir5133-201ENSMUST00000174955 77 ntBASIC23.09■■□□□ 1.29
Col11a1Q61245 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Col11a1Q61245 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col11a1Q61245 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col11a1Q61245 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col11a1Q61245 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.08■■□□□ 1.29
Col11a1Q61245 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col11a1Q61245 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.08■■□□□ 1.29
Col11a1Q61245 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a1Q61245 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.08■■□□□ 1.28
Col11a1Q61245 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a1Q61245 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a1Q61245 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a1Q61245 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.07■■□□□ 1.28
Col11a1Q61245 Gm7514-201ENSMUST00000209475 934 ntBASIC23.07■■□□□ 1.28
Col11a1Q61245 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a1Q61245 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a1Q61245 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a1Q61245 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a1Q61245 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a1Q61245 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a1Q61245 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a1Q61245 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Col11a1Q61245 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a1Q61245 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a1Q61245 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a1Q61245 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a1Q61245 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Col11a1Q61245 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Col11a1Q61245 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a1Q61245 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a1Q61245 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.04■■□□□ 1.28
Col11a1Q61245 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col11a1Q61245 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.04■■□□□ 1.28
Col11a1Q61245 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.04■■□□□ 1.28
Col11a1Q61245 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Col11a1Q61245 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col11a1Q61245 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.04■■□□□ 1.28
Col11a1Q61245 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Col11a1Q61245 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Col11a1Q61245 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Col11a1Q61245 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.03■■□□□ 1.28
Col11a1Q61245 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.03■■□□□ 1.28
Col11a1Q61245 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a1Q61245 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a1Q61245 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Col11a1Q61245 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a1Q61245 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a1Q61245 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC23.02■■□□□ 1.28
Col11a1Q61245 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.01■■□□□ 1.27
Col11a1Q61245 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a1Q61245 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Col11a1Q61245 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col11a1Q61245 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms