Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FntaQ61239 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FntaQ61239 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.26■□□□□ 0.99
FntaQ61239 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FntaQ61239 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FntaQ61239 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.25■□□□□ 0.99
FntaQ61239 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FntaQ61239 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FntaQ61239 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FntaQ61239 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FntaQ61239 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
FntaQ61239 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.23■□□□□ 0.99
FntaQ61239 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FntaQ61239 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FntaQ61239 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
FntaQ61239 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FntaQ61239 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FntaQ61239 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
FntaQ61239 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FntaQ61239 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FntaQ61239 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FntaQ61239 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
FntaQ61239 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.22■□□□□ 0.99
FntaQ61239 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.22■□□□□ 0.99
FntaQ61239 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FntaQ61239 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FntaQ61239 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FntaQ61239 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FntaQ61239 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FntaQ61239 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
FntaQ61239 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
FntaQ61239 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.2■□□□□ 0.98
FntaQ61239 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
FntaQ61239 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.2■□□□□ 0.98
FntaQ61239 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FntaQ61239 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
FntaQ61239 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.19■□□□□ 0.98
FntaQ61239 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.19■□□□□ 0.98
FntaQ61239 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
FntaQ61239 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FntaQ61239 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
FntaQ61239 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FntaQ61239 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FntaQ61239 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.17■□□□□ 0.98
FntaQ61239 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FntaQ61239 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FntaQ61239 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FntaQ61239 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.17■□□□□ 0.98
FntaQ61239 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.17■□□□□ 0.98
FntaQ61239 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FntaQ61239 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FntaQ61239 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
FntaQ61239 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FntaQ61239 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
FntaQ61239 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
FntaQ61239 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FntaQ61239 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
FntaQ61239 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
FntaQ61239 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms