Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf4Q61112 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.39■□□□□ 0.86
Sdf4Q61112 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.39■□□□□ 0.86
Sdf4Q61112 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sdf4Q61112 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sdf4Q61112 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sdf4Q61112 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sdf4Q61112 Gm12922-201ENSMUST00000120626 809 ntBASIC20.39■□□□□ 0.85
Sdf4Q61112 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.39■□□□□ 0.85
Sdf4Q61112 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdf4Q61112 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sdf4Q61112 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.38■□□□□ 0.85
Sdf4Q61112 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Sdf4Q61112 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sdf4Q61112 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdf4Q61112 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sdf4Q61112 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdf4Q61112 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.38■□□□□ 0.85
Sdf4Q61112 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdf4Q61112 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdf4Q61112 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.37■□□□□ 0.85
Sdf4Q61112 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.37■□□□□ 0.85
Sdf4Q61112 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.37■□□□□ 0.85
Sdf4Q61112 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sdf4Q61112 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdf4Q61112 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.36■□□□□ 0.85
Sdf4Q61112 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Sdf4Q61112 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf4Q61112 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdf4Q61112 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sdf4Q61112 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.35■□□□□ 0.85
Sdf4Q61112 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.35■□□□□ 0.85
Sdf4Q61112 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdf4Q61112 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdf4Q61112 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdf4Q61112 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdf4Q61112 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.34■□□□□ 0.85
Sdf4Q61112 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sdf4Q61112 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf4Q61112 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf4Q61112 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf4Q61112 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf4Q61112 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf4Q61112 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sdf4Q61112 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.33■□□□□ 0.85
Sdf4Q61112 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Sdf4Q61112 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.33■□□□□ 0.85
Sdf4Q61112 Golgb1-201ENSMUST00000023534 498 ntBASIC20.33■□□□□ 0.85
Sdf4Q61112 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf4Q61112 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdf4Q61112 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdf4Q61112 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdf4Q61112 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.32■□□□□ 0.84
Sdf4Q61112 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.32■□□□□ 0.84
Sdf4Q61112 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sdf4Q61112 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf4Q61112 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf4Q61112 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.3■□□□□ 0.84
Sdf4Q61112 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sdf4Q61112 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdf4Q61112 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Sdf4Q61112 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sdf4Q61112 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdf4Q61112 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.3■□□□□ 0.84
Sdf4Q61112 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms