Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sim2Q61079 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sim2Q61079 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sim2Q61079 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sim2Q61079 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.74■□□□□ 0.75
Sim2Q61079 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sim2Q61079 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sim2Q61079 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sim2Q61079 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sim2Q61079 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sim2Q61079 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.73■□□□□ 0.75
Sim2Q61079 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sim2Q61079 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sim2Q61079 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sim2Q61079 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sim2Q61079 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sim2Q61079 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sim2Q61079 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sim2Q61079 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.72■□□□□ 0.75
Sim2Q61079 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.72■□□□□ 0.75
Sim2Q61079 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.72■□□□□ 0.75
Sim2Q61079 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sim2Q61079 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sim2Q61079 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sim2Q61079 Gm13234-201ENSMUST00000120010 747 ntBASIC19.71■□□□□ 0.75
Sim2Q61079 Gm12441-201ENSMUST00000121806 588 ntBASIC19.71■□□□□ 0.75
Sim2Q61079 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sim2Q61079 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sim2Q61079 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sim2Q61079 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sim2Q61079 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sim2Q61079 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sim2Q61079 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sim2Q61079 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sim2Q61079 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sim2Q61079 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.7■□□□□ 0.74
Sim2Q61079 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.7■□□□□ 0.74
Sim2Q61079 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sim2Q61079 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.7■□□□□ 0.74
Sim2Q61079 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sim2Q61079 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.69■□□□□ 0.74
Sim2Q61079 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sim2Q61079 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sim2Q61079 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.69■□□□□ 0.74
Sim2Q61079 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.69■□□□□ 0.74
Sim2Q61079 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sim2Q61079 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sim2Q61079 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.68■□□□□ 0.74
Sim2Q61079 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sim2Q61079 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sim2Q61079 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sim2Q61079 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sim2Q61079 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sim2Q61079 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sim2Q61079 Gm10653-202ENSMUST00000139570 835 ntBASIC19.67■□□□□ 0.74
Sim2Q61079 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.67■□□□□ 0.74
Sim2Q61079 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.67■□□□□ 0.74
Sim2Q61079 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sim2Q61079 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sim2Q61079 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.66■□□□□ 0.74
Sim2Q61079 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Sim2Q61079 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sim2Q61079 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sim2Q61079 Reep4-203ENSMUST00000226563 1444 ntBASIC19.66■□□□□ 0.74
Sim2Q61079 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sim2Q61079 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Sim2Q61079 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sim2Q61079 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.65■□□□□ 0.74
Sim2Q61079 Gm7514-201ENSMUST00000209475 934 ntBASIC19.65■□□□□ 0.74
Sim2Q61079 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.65■□□□□ 0.74
Sim2Q61079 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.65■□□□□ 0.74
Sim2Q61079 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sim2Q61079 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms