Protein–RNA interactions for Protein: Q61068

Usp17la, Ubiquitin carboxyl-terminal hydrolase 17-like protein A, mousemouse

Predictions only

Length 526 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp17laQ61068 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp17laQ61068 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Usp17laQ61068 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp17laQ61068 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
Usp17laQ61068 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.34■■□□□ 1.01
Usp17laQ61068 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp17laQ61068 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Usp17laQ61068 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp17laQ61068 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.34■■□□□ 1.01
Usp17laQ61068 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.34■■□□□ 1.01
Usp17laQ61068 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.34■■□□□ 1.01
Usp17laQ61068 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp17laQ61068 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Gm42642-201ENSMUST00000200683 355 ntBASIC21.33■■□□□ 1.01
Usp17laQ61068 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Usp17laQ61068 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp17laQ61068 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp17laQ61068 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp17laQ61068 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Usp17laQ61068 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.33■■□□□ 1
Usp17laQ61068 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp17laQ61068 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp17laQ61068 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.32■■□□□ 1
Usp17laQ61068 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Usp17laQ61068 Gm26571-201ENSMUST00000181399 666 ntBASIC21.32■■□□□ 1
Usp17laQ61068 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp17laQ61068 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp17laQ61068 Gm11421-201ENSMUST00000122124 294 ntBASIC21.31■■□□□ 1
Usp17laQ61068 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Usp17laQ61068 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Usp17laQ61068 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.31■■□□□ 1
Usp17laQ61068 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Usp17laQ61068 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.3■■□□□ 1
Usp17laQ61068 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp17laQ61068 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.3■■□□□ 1
Usp17laQ61068 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp17laQ61068 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.3■■□□□ 1
Usp17laQ61068 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Usp17laQ61068 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Usp17laQ61068 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.29■■□□□ 1
Usp17laQ61068 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp17laQ61068 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp17laQ61068 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp17laQ61068 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp17laQ61068 Gm7291-201ENSMUST00000199147 382 ntBASIC21.29■■□□□ 1
Usp17laQ61068 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Usp17laQ61068 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp17laQ61068 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Usp17laQ61068 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp17laQ61068 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp17laQ61068 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp17laQ61068 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.28■■□□□ 1
Usp17laQ61068 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp17laQ61068 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp17laQ61068 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.27■■□□□ 1
Usp17laQ61068 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp17laQ61068 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Usp17laQ61068 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp17laQ61068 Gm42569-201ENSMUST00000200539 472 ntBASIC21.27■■□□□ 1
Usp17laQ61068 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp17laQ61068 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp17laQ61068 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Gm10849-201ENSMUST00000100397 618 ntBASIC21.26■□□□□ 0.99
Usp17laQ61068 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Usp17laQ61068 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp17laQ61068 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp17laQ61068 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp17laQ61068 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp17laQ61068 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp17laQ61068 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp17laQ61068 Gm27405-201ENSMUST00000184201 112 ntBASIC21.24■□□□□ 0.99
Usp17laQ61068 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp17laQ61068 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.24■□□□□ 0.99
Usp17laQ61068 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.24■□□□□ 0.99
Usp17laQ61068 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp17laQ61068 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp17laQ61068 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp17laQ61068 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp17laQ61068 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp17laQ61068 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp17laQ61068 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp17laQ61068 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp17laQ61068 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp17laQ61068 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp17laQ61068 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms