Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Mir6236-201ENSMUST00000184437 123 ntBASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Gm42642-201ENSMUST00000200683 355 ntBASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-2Q5R1I4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Gm42569-201ENSMUST00000200539 472 ntBASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav6-2Q5R1I4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-2Q5R1I4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Gm11421-201ENSMUST00000122124 294 ntBASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Gm7291-201ENSMUST00000199147 382 ntBASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-2Q5R1I4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-2Q5R1I4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-2Q5R1I4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-2Q5R1I4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Gm27405-201ENSMUST00000184201 112 ntBASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Gm29257-201ENSMUST00000186115 639 ntBASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms