Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Gm45444-201ENSMUST00000211394 898 ntBASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav8d-1Q5R1H8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav8d-1Q5R1H8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav8d-1Q5R1H8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8d-1Q5R1H8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8d-1Q5R1H8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8d-1Q5R1H8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Gm43566-201ENSMUST00000196851 808 ntBASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav8d-1Q5R1H8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav8d-1Q5R1H8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-1Q5R1H8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-1Q5R1H8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-1Q5R1H8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav8d-1Q5R1H8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-1Q5R1H8 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-1Q5R1H8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms