Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Gm7143-201ENSMUST00000222811 859 ntBASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5d-4Q5R1F6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5d-4Q5R1F6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5d-4Q5R1F6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5d-4Q5R1F6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav5d-4Q5R1F6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5d-4Q5R1F6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav5d-4Q5R1F6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5d-4Q5R1F6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5d-4Q5R1F6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5d-4Q5R1F6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Gm9959-201ENSMUST00000068277 390 ntBASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5d-4Q5R1F6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5d-4Q5R1F6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5d-4Q5R1F6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5d-4Q5R1F6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5d-4Q5R1F6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5d-4Q5R1F6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5d-4Q5R1F6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5d-4Q5R1F6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav5d-4Q5R1F6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav5d-4Q5R1F6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav5d-4Q5R1F6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav5d-4Q5R1F6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5d-4Q5R1F6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms