Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps41Q5KU39 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Vps41Q5KU39 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps41Q5KU39 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps41Q5KU39 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.94■□□□□ 0.94
Vps41Q5KU39 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps41Q5KU39 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.93■□□□□ 0.94
Vps41Q5KU39 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps41Q5KU39 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps41Q5KU39 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Vps41Q5KU39 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps41Q5KU39 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Vps41Q5KU39 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.9■□□□□ 0.94
Vps41Q5KU39 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps41Q5KU39 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps41Q5KU39 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps41Q5KU39 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps41Q5KU39 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps41Q5KU39 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.88■□□□□ 0.93
Vps41Q5KU39 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps41Q5KU39 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps41Q5KU39 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps41Q5KU39 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.87■□□□□ 0.93
Vps41Q5KU39 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.86■□□□□ 0.93
Vps41Q5KU39 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.86■□□□□ 0.93
Vps41Q5KU39 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps41Q5KU39 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms