Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm37856-201ENSMUST00000191634 999 ntBASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Vps13aQ5H8C4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Gm20049-201ENSMUST00000219950 730 ntBASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps13aQ5H8C4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps13aQ5H8C4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps13aQ5H8C4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps13aQ5H8C4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.34■□□□□ 0.85
Vps13aQ5H8C4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps13aQ5H8C4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.33■□□□□ 0.85
Vps13aQ5H8C4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps13aQ5H8C4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps13aQ5H8C4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps13aQ5H8C4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps13aQ5H8C4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.33■□□□□ 0.84
Vps13aQ5H8C4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps13aQ5H8C4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vps13aQ5H8C4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vps13aQ5H8C4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vps13aQ5H8C4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps13aQ5H8C4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps13aQ5H8C4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps13aQ5H8C4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps13aQ5H8C4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps13aQ5H8C4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.32■□□□□ 0.84
Vps13aQ5H8C4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps13aQ5H8C4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.3■□□□□ 0.84
Vps13aQ5H8C4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps13aQ5H8C4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps13aQ5H8C4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.29■□□□□ 0.84
Vps13aQ5H8C4 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.29■□□□□ 0.84
Vps13aQ5H8C4 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.29■□□□□ 0.84
Vps13aQ5H8C4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps13aQ5H8C4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.28■□□□□ 0.84
Vps13aQ5H8C4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps13aQ5H8C4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vps13aQ5H8C4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Gm7514-201ENSMUST00000209475 934 ntBASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vps13aQ5H8C4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms