Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h1Q4VGL6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h1Q4VGL6 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rc3h1Q4VGL6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rc3h1Q4VGL6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.39■■□□□ 1.33
Rc3h1Q4VGL6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rc3h1Q4VGL6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rc3h1Q4VGL6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.39■■□□□ 1.33
Rc3h1Q4VGL6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rc3h1Q4VGL6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Rc3h1Q4VGL6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Rc3h1Q4VGL6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h1Q4VGL6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h1Q4VGL6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h1Q4VGL6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rc3h1Q4VGL6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.36■■□□□ 1.33
Rc3h1Q4VGL6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.36■■□□□ 1.33
Rc3h1Q4VGL6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rc3h1Q4VGL6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rc3h1Q4VGL6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rc3h1Q4VGL6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rc3h1Q4VGL6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h1Q4VGL6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h1Q4VGL6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.34■■□□□ 1.33
Rc3h1Q4VGL6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h1Q4VGL6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h1Q4VGL6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rc3h1Q4VGL6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rc3h1Q4VGL6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rc3h1Q4VGL6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Rc3h1Q4VGL6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rc3h1Q4VGL6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Mir6236-201ENSMUST00000184437 123 ntBASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rc3h1Q4VGL6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.3■■□□□ 1.32
Rc3h1Q4VGL6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h1Q4VGL6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h1Q4VGL6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h1Q4VGL6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rc3h1Q4VGL6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.3■■□□□ 1.32
Rc3h1Q4VGL6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rc3h1Q4VGL6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms