Protein–RNA interactions for Protein: Q3V3R4

Itga1, Integrin alpha-1, mousemouse

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itga1Q3V3R4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itga1Q3V3R4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itga1Q3V3R4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itga1Q3V3R4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itga1Q3V3R4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Itga1Q3V3R4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Itga1Q3V3R4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Itga1Q3V3R4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itga1Q3V3R4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itga1Q3V3R4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Itga1Q3V3R4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itga1Q3V3R4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itga1Q3V3R4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itga1Q3V3R4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Itga1Q3V3R4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itga1Q3V3R4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Itga1Q3V3R4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Itga1Q3V3R4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itga1Q3V3R4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itga1Q3V3R4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itga1Q3V3R4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itga1Q3V3R4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.61■□□□□ 0.89
Itga1Q3V3R4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Gm7143-201ENSMUST00000222811 859 ntBASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itga1Q3V3R4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Golph3-202ENSMUST00000226517 2359 ntBASIC20.59■□□□□ 0.89
Itga1Q3V3R4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itga1Q3V3R4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Itga1Q3V3R4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Itga1Q3V3R4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Itga1Q3V3R4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.58■□□□□ 0.89
Itga1Q3V3R4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Itga1Q3V3R4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Itga1Q3V3R4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Itga1Q3V3R4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itga1Q3V3R4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Itga1Q3V3R4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Itga1Q3V3R4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Itga1Q3V3R4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms