Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Cnga4Q3UW12 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnga4Q3UW12 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnga4Q3UW12 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Cnga4Q3UW12 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.36■□□□□ 0.85
Cnga4Q3UW12 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnga4Q3UW12 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Cnga4Q3UW12 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cnga4Q3UW12 Gm27502-201ENSMUST00000183495 199 ntBASIC20.34■□□□□ 0.85
Cnga4Q3UW12 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cnga4Q3UW12 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnga4Q3UW12 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnga4Q3UW12 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.34■□□□□ 0.85
Cnga4Q3UW12 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cnga4Q3UW12 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cnga4Q3UW12 Gm14523-201ENSMUST00000117260 558 ntBASIC20.33■□□□□ 0.85
Cnga4Q3UW12 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cnga4Q3UW12 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cnga4Q3UW12 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.33■□□□□ 0.84
Cnga4Q3UW12 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cnga4Q3UW12 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cnga4Q3UW12 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cnga4Q3UW12 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnga4Q3UW12 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cnga4Q3UW12 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms